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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833585.1_cds_XP_016505295.1_18651
CDS Infomation

[gene=LOC107823208] [db_xref=GeneID:107823208] [protein=cysteine proteinase 3-like] [protein_id=XP_016505295.1] [location=complement(join(30646..30819,31054..31185,31363..31627,31730..31803,32181..32296,33143..33264,33723..33922))] [gbkey=CDS]
Sequence

ATGTCTCGTTTCACACTCCTACTGGCTCTCGTCGTCGCCGGTGGCCTTTTCGCCGCCGCA
CTAGCCGGACCGGCAACCTTCGCCGTTGAGAATCCGATCAGGCAAGTCGTTTCCGACGGT
TTGCATGAGCTGGAGAACGGAATTCTCCAAGTCGTGGGCCAGAGTCGCCATGCTCTCTCC
TTCGTTCGCTTTGCTCACAGGTATGGGAAGAGGTATGAGTCAGTTGAGGAGATAAAGCAA
AGGTTCGAGGTATTCTTGGACAATTTGAAGATGATTCGATCGCATAACAAGAAAGGACTA
TCATACAAACTCGGTGTCAATGAGTTTACCGACCTAACATGGGATGAGTTCCGAAGAGAC
AGGTTGGGGGCAGCTCAAAACTGCTCTGCCACAACAAAGGGCAATGTCAAGCTCACTAAC
GCCGTTCTGCCGGAGACGAAAGACTGGAGGGAAGATGGGATTGTAAGCCCAGTCAAGAAT
CAGGGAAAGTGCGGATCTTGCTGGACATTCAGCACTACTGGTGCACTAGAAGCAGCATAT
AGCCAAGCATTTGGGAAGGGAATCTCTCTATCTGAGCAGCAGCTTGTGGACTGTGCTGGA
GCTTTTAATAACTTTGGCTGCAATGGTGGGCTCCCATCACAAGCCTTCGAGTACATTAAA
TCCAATGGCGGTCTTGACACTGAAGAAGCATATCCATACACTGGCAAGAATGGCTTATGT
AAATTCTCATCAGAAAATGTTGGTGTCAAAGTCATCGATTCTGTCAATATTACCTTGGGT
GCTGAAGATGAACTAAAGTACGCAGTTGCATTGGTTAGACCCGTTAGTATTGCTTTTGAG
GTGATCAAAGGTTTCAAACAATACAAGAGTGGTGTTTACAGCAGCACAGAATGCGGCAAC
ACTCCCATGGATGTAAACCATGCTGTTCTTGCTGTGGGTTACGGTGTTGAAAATGGTGTT
CCTTATTGGCTCATCAAGAACTCATGGGGAGCAGATTGGGGTGACGATGGATACTTCAAG
ATGGAGATGGGAAAGAACATGTGTGGTATTGCCACTTGCGCATCCTACCCTGTCGTTGCC
TGA

Peptide Sequence

PEP ID

XP_016505295.1
PEP Infomation

PREDICTED: cysteine proteinase 3-like [Nicotiana tabacum]
Sequence

MSRFTLLLALVVAGGLFAAALAGPATFAVENPIRQVVSDGLHELENGILQVVGQSRHALS
FVRFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRD
RLGAAQNCSATTKGNVKLTNAVLPETKDWREDGIVSPVKNQGKCGSCWTFSTTGALEAAY
SQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLC
KFSSENVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYSSTECGN
TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDDGYFKMEMGKNMCGIATCASYPVVA

Transcript Sequence

Gene sequence data has not been registered.